Basic Information
Locus ID:
gene.Thate02g35750
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 601454337 | 601455485 | - | gene.Thate02g35750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 42,853.14 Da | 59.85 | 82.15 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 2 | 40 | 1.8E-8 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 118 | 282 | 2.75E-5 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 48 | 9.03E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 40 | 1.1E-8 | - |
| SMART | SM00256 | fbox_2 | 4 | 44 | 2.5E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 44 | 11.802483 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 6 | gene.Thate02g35740, gene.Thate02g35750, gene.Thate02g35760 ... |