Basic Information
Locus ID:
gene.Thate02g33960
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CDPK9
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 589352251 | 589354439 | - | gene.Thate02g33960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 38,181.82 Da | 63.12 | 72.83 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 100 | 335 | 4.9E-57 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 81 | 333 | 1.48E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 336 | 3.6E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 101 | 182 | 1.4E-21 | - |
| SMART | SM00220 | serkin_6 | 99 | 330 | 1.7E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 99 | 336 | 40.852219 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 105 | 132 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61950.1 | calcium-dependent protein kinase 19. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_030446827.1 | calcium-dependent protein kinase 29-like isoform X4 [Syzygium oleosum] | 0 |
| Q7XSQ5 | Calcium-dependent protein kinase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK12 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P5A572 | Serine/threonine protein kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_367900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 6 | gene.Thate02g33950, gene.Thate02g33960, gene.Thate04g04940 ... |