halophFGD

Basic Information

Locus ID: gene.Thate02g33950

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Short Name: CDPK6

Description: calcium-dependent protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr02	589350233	589352235	-	gene.Thate02g33950

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.30	26,047.06 Da	28.37	80.26	-0.31

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF47473	EF-hand	65	206	6.58E-17	IPR011992
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1	42	1.0E-4	IPR011009
Gene3D	G3DSA:1.10.238.10	-	38	212	6.3E-16	-

KEGG Pathway

KO Term:

K13412 (calcium-dependent protein kinase [EC:2.7.11.1])

Pathway:

ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G38910.1	calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase
RefSeq	XP_027333838.1	calcium-dependent protein kinase 9-like isoform X4 [Abrus precatorius]
Swiss-Prot	P28582	Calcium-dependent protein kinase OS=Daucus carota OX=4039 PE=2 SV=2
TrEMBL	A0A8B8JTE5	calcium-dependent protein kinase 9-like isoform X4 OS=Abrus precatorius OX=3816 GN=LOC113848493 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Hydrocharitaceae	Thalassia testudinum	6	gene.Thate02g33950, gene.Thate02g33960, gene.Thate04g04940 ... gene.Thate04g04960, gene.Thate04g04980, gene.Thate04g05010