Basic Information
Locus ID:
gene.Thate02g32510
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 579833596 | 579836139 | - | gene.Thate02g32510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 66,401.68 Da | 48.20 | 106.88 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 554 | 571 | 0.53 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 171 | 514 | 1.73E-33 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 470 | 624 | 3.14E-14 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 49 | 93 | 4.58E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 410 | 634 | 6.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 131 | 221 | 1.9E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 407 | 2.4E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 58 | 93 | 6.1E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 222 | 301 | 1.0E-11 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 204 | 229 | 3.2E-6 | IPR006553 |
| SMART | SM00256 | fbox_2 | 60 | 101 | 0.0035 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 523 | 548 | 2.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 417 | 452 | 17.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 469 | 494 | 2.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 575 | 600 | 660.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 336 | 361 | 71.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 178 | 203 | 0.14 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 549 | 573 | 0.22 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 496 | 521 | 0.26 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 601 | 626 | 240.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 362 | 387 | 0.023 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 388 | 413 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 256 | 281 | 1.5E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 230 | 255 | 2.4E-4 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 56 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_042405314.1 | EIN3-binding F-box protein 1-like [Zingiber officinale] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835S6Y2 | F-box domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_002385 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology