Basic Information
Locus ID:
gene.Thate02g29620
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 555107810 | 555111115 | + | gene.Thate02g29620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 119,605.94 Da | 41.92 | 102.69 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 828 | 1096 | 9.3901E-88 | - |
| Pfam | PF13516 | Leucine Rich repeat | 398 | 412 | 0.86 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 825 | 1022 | 3.1E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 1.8E-13 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 239 | 261 | 0.15 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 287 | 309 | 0.26 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 801 | 1093 | 1.34E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 167 | 700 | 8.84E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 466 | 704 | 4.6E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 898 | 1098 | 2.5E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 102 | 7.4E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 785 | 897 | 1.1E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 106 | 329 | 1.1E-56 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 455 | 9.8E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 608 | 632 | 21.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 822 | 1100 | 5.3E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 656 | 680 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 9.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 236 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 166 | 13.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 634 | 656 | 7.088198 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 822 | 1101 | 38.081955 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 828 | 850 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 942 | 954 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_039116940.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843TJ14 | Protein kinase domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_001401 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology