halophFGD

Basic Information

Locus ID: gene.Thate02g27290

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr02	525700783	525702133	-	gene.Thate02g27290

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.26	14,037.94 Da	30.06	77.83	-0.19

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	16	88	8.5E-16	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	8	91	2.56E-25	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	4	100	1.8E-27	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	129	17.206038	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	37	49	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G25220.6	-
RefSeq	XP_020265697.1	probable receptor-like protein kinase At1g80640 [Asparagus officinalis]
Swiss-Prot	Q0V7T5	Probable receptor-like protein kinase At1g80640 OS=Arabidopsis thaliana OX=3702 GN=At1g80640 PE=2 SV=1
TrEMBL	Q0E3C5	Os02g0182600 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0182600 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate02g27290
Poaceae	Lolium multiflorum	1	gene-QYE76_007557
Poaceae	Sporobolus alterniflorus	1	Chr14G005320