Basic Information
Locus ID:
gene.Thate02g25930
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the FPP GGPP synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 505949841 | 505950359 | - | gene.Thate02g25930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 19,069.86 Da | 44.37 | 100.17 | 0.26 |
Protein Domain:
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Module:
Reaction:
R01658 (Dimethylallyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + Geranyl diphosphate)
R02003 (Geranyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + trans,trans-Farnesyl diphosphate)
R02061 (trans,trans-Farnesyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + Geranylgeranyl diphosphate)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G18620.1 | Terpenoid synthases superfamily protein. | 0 |
| RefSeq | XP_042376250.1 | heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Zingiber officinale] | 0 |
| Q9ZU77 | Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18620 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J5H2H7 | Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Zingiber officinale OX=94328 GN=ZIOFF_024510 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology