Basic Information
Locus ID:
gene.Thate02g25200
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 493944030 | 493981934 | + | gene.Thate02g25200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 29,009.62 Da | 38.36 | 71.02 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 34 | 268 | 2.0E-80 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 156 | 258 | 3.88E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 156 | 271 | 7.2E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 161 | 259 | 27.202047 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22670.1 | indoleacetic acid-induced protein 8. IAA8 (IAA8) gene is auxin inducible. | 0 |
| RefSeq | XP_008802939.2 | auxin-responsive protein IAA17-like [Phoenix dactylifera] | 0 |
| Q38826 | Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1YDJ7 | Auxin-responsive protein OS=Anthurium amnicola OX=1678845 GN=IAA27_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology