Basic Information
Locus ID:
gene.Thate02g23980
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 452522280 | 452524882 | + | gene.Thate02g23980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 20,225.08 Da | 24.43 | 102.30 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 16 | 139 | 3.2E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 144 | 4.37E-41 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 54 | 1.5E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 55 | 149 | 4.4E-27 | - |
| SMART | SM00220 | serkin_6 | 6 | 177 | 6.2E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 178 | 22.605225 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 100 | 112 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021887807.1 | probable serine/threonine-protein kinase At1g01540 [Carica papaya] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0E0K860 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB02g004720.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g23980 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-3918, nbisL1-mrna-9040 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr12G004560 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-56584 |