Basic Information
Locus ID:
gene.Thate02g22450
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 410804649 | 410805323 | + | gene.Thate02g22450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 25,137.37 Da | 59.34 | 91.92 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13499 | EF-hand domain pair | 69 | 130 | 8.3E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 146 | 206 | 1.8E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 67 | 206 | 7.64E-38 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 5 | 137 | 1.8E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 138 | 213 | 3.8E-21 | - |
| SMART | SM00054 | efh_1 | 106 | 134 | 4.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 145 | 173 | 0.0067 | IPR002048 |
| SMART | SM00054 | efh_1 | 181 | 209 | 1.6E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 70 | 98 | 0.0076 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 66 | 101 | 13.843916 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 102 | 137 | 9.296966 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 141 | 176 | 13.14653 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 177 | 212 | 12.867577 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 79 | 91 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 190 | 202 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 154 | 166 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 115 | 127 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 59 | - | - |
| Coils | Coil | Coil | 36 | 56 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_008800887.1 | probable calcium-binding protein CML14 [Phoenix dactylifera] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D1Z1T3 | Putative calcium-binding protein CML14 (Fragment) OS=Anthurium amnicola OX=1678845 GN=CML14_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology