Basic Information
Locus ID:
gene.Thate02g20620
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 333942566 | 334044302 | - | gene.Thate02g20620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 62,743.79 Da | 38.86 | 83.66 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 86 | 344 | 1.27543E-137 | - |
| CDD | cd00051 | EFh | 393 | 450 | 3.69572E-16 | IPR002048 |
| CDD | cd00051 | EFh | 464 | 526 | 1.81574E-18 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 87 | 345 | 6.0E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 464 | 526 | 1.3E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 391 | 451 | 1.1E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 373 | 552 | 5.68E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 84 | 354 | 8.09E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 353 | 8.9E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 88 | 172 | 4.5E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 354 | 529 | 1.0E-51 | - |
| SMART | SM00220 | serkin_6 | 87 | 345 | 8.4E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 464 | 492 | 2.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 392 | 420 | 1.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 500 | 528 | 3.6E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 428 | 456 | 0.21 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 460 | 495 | 13.732334 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 424 | 459 | 8.739058 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 87 | 345 | 48.484581 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 496 | 531 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 388 | 423 | 15.657116 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 93 | 116 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 509 | 521 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 473 | 485 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 437 | 449 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 207 | 219 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 401 | 413 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 44 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_009388458.1 | PREDICTED: calcium-dependent protein kinase 10-like [Musa acuminata subsp. malaccensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804I4J1 | Calcium-dependent protein kinase 30 OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology