Basic Information
Locus ID:
gene.Thate02g20010
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Vacuolar-sorting receptor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 323814743 | 323817318 | - | gene.Thate02g20010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 15,017.68 Da | 38.75 | 74.58 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14740.1 | vaculolar sorting receptor 3. Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds. | 0 |
| RefSeq | XP_028780601.1 | vacuolar-sorting receptor 1-like [Prosopis alba] | 0 |
| O80977 | Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana OX=3702 GN=VSR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1J3FH63 | Vacuolar-sorting receptor 3 (Fragment) OS=Noccaea caerulescens OX=107243 GN=LC_TR15471_c3_g1_i1_g.52720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 82 | Sp1g24500.v2.2, Sp1g24510.v2.2, Sp1g30380.v2.2 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g20010 |