Basic Information
Locus ID:
gene.Thate02g19820
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 320945917 | 320969866 | + | gene.Thate02g19820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 58,764.33 Da | 49.26 | 61.48 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08446 | PAS fold | 485 | 519 | 1.4E-9 | IPR013654 |
| Pfam | PF03106 | WRKY DNA -binding domain | 380 | 400 | 7.4E-6 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 204 | 260 | 1.2E-24 | IPR003657 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 490 | 520 | 1.94E-5 | IPR035965 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 201 | 262 | 1.02E-24 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 371 | 399 | 1.44E-8 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 366 | 416 | 8.6E-14 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 189 | 263 | 7.3E-26 | IPR036576 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 487 | 529 | 8.0E-5 | - |
| SMART | SM00774 | WRKY_cls | 203 | 261 | 7.4E-35 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 379 | 425 | 1.1E-5 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 204 | 262 | 23.77779 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 374 | 399 | 13.712112 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 426 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_043725993.1 | probable WRKY transcription factor 3 [Telopea speciosissima] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B7AE91 | Putative DNA binding protein WRKY2 OS=Davidia involucrata OX=16924 GN=Din_023689 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology