Basic Information
Locus ID:
gene.Thate02g16890
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
leucine-rich repeat protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 175537675 | 175540077 | + | gene.Thate02g16890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 85,377.40 Da | 42.37 | 79.70 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 484 | 777 | 1.5301E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 482 | 775 | 4.5E-39 | IPR001245 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 25 | 288 | 3.66E-18 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 776 | 5.66E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 559 | 792 | 6.2E-46 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 130 | 334 | 4.5E-19 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 439 | 558 | 5.1E-32 | - |
| SMART | SM00220 | serkin_6 | 478 | 780 | 1.4E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 478 | 780 | 34.817001 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 616 | 628 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 484 | 506 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_020696451.1 | putative serine/threonine-protein kinase-like protein CCR3 [Dendrobium catenatum] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I0WLJ9 | Serine/threonine-protein kinase-like protein CCR3 OS=Dendrobium catenatum OX=906689 GN=CCR3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology