Basic Information
Locus ID:
gene.Thate02g16340
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 162172218 | 162363502 | + | gene.Thate02g16340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 84,370.96 Da | 56.94 | 83.61 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 501 | 749 | 1.42545E-130 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 496 | 749 | 6.4E-71 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 132 | 336 | 1.2E-72 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 486 | 749 | 2.7E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 761 | 5.5E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 488 | 573 | 4.9E-38 | - |
| SMART | SM00220 | serkin_6 | 495 | 752 | 5.1E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 495 | 752 | 44.993481 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 616 | 628 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 501 | 522 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 569 | 582 | 5.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 610 | 628 | 5.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 720 | 742 | 5.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 657 | 667 | 5.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 676 | 698 | 5.8E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_039120055.1 | serine/threonine-protein kinase CTR1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8D7BC50 | (wild Malaysian banana) hypothetical protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=GSMUA_11860.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology