Basic Information
Locus ID:
gene.Thate02g12800
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 100933670 | 100935238 | - | gene.Thate02g12800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 58,386.31 Da | 47.70 | 80.59 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01535 | PPR repeat | 223 | 249 | 0.0024 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 252 | 281 | 1.4E-5 | IPR002885 |
| Pfam | PF14432 | DYW family of nucleic acid deaminases | 425 | 512 | 3.1E-30 | IPR032867 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 160 | 313 | 1.2E-25 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 252 | 285 | 3.1E-6 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 223 | 248 | 5.4E-4 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 249 | 283 | 11.279235 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 218 | 248 | 8.834866 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 83 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G15690.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_008810384.2 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Phoenix dactylifera] | 0 |
| Q9ZQE5 | Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0IB31 | Putative Pentatricopeptide repeat-containing protein, mitochondrial OS=Cocos nucifera OX=13894 GN=COCNU_06G004840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology