Basic Information
Locus ID:
gene.Thate02g12750
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 100240045 | 100265572 | - | gene.Thate02g12750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 45,216.60 Da | 33.92 | 104.65 | 0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 1 | 407 | 1.1152E-51 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 2 | 367 | 8.6E-26 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 2 | 397 | 8.24E-33 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 1 | 413 | 4.0E-35 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 416 | 9.569702 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 40 | 59 | 7.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 351 | 374 | 7.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 133 | 155 | 7.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 316 | 336 | 7.5E-7 | IPR001958 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 210 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_020083603.1 | hippocampus abundant transcript-like protein 1 [Ananas comosus] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D1XDC4 | Hippocampus abundant transcript 1 protein OS=Anthurium amnicola OX=1678845 GN=Hiat1_1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology