Basic Information
Locus ID:
gene.Thate02g07070
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 46783371 | 46784993 | - | gene.Thate02g07070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 59,389.75 Da | 51.40 | 71.07 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 357 | 427 | 1.83451E-43 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 57 | 239 | 1.4E-49 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 364 | 408 | 1.8E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 363 | 430 | 3.93E-19 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 361 | 431 | 1.2E-18 | IPR036638 |
| SMART | SM00353 | finulus | 366 | 415 | 7.8E-17 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 360 | 409 | 17.161327 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 40 | - | - |
| Coils | Coil | Coil | 406 | 426 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_015085364.1 | transcription factor MYC2-like [Solanum pennellii] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438EQS2 | Transcription factor MYC2 OS=Vitis vinifera OX=29760 GN=MYC2_1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology