Basic Information
Locus ID:
gene.Thate02g01200
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 7671852 | 7761352 | + | gene.Thate02g01200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 43,475.38 Da | 47.31 | 106.86 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 100 | 337 | 3.9E-73 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 91 | 337 | 8.01E-40 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 101 | 397 | 1.3E-79 | IPR027417 |
| SMART | SM00382 | AAA_5 | 124 | 299 | 4.3E-4 | IPR003593 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 102 | 261 | 26.032299 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 276 | 342 | 18.540133 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 232 | 261 | 3.8E-50 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 365 | 382 | 3.8E-50 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 160 | 189 | 3.8E-50 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 194 | 223 | 3.8E-50 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 280 | 308 | 3.8E-50 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 313 | 342 | 3.8E-50 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_010907253.1 | DNA repair protein recA homolog 2, mitochondrial isoform X2 [Elaeis guineensis] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9QDI6 | DNA repair protein recA homolog 2, mitochondrial isoform X2 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105033965 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology