Basic Information
Locus ID:
gene.Thate01g34880
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 574245592 | 574249502 | - | gene.Thate01g34880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 24,507.61 Da | 27.94 | 88.29 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 56 | 221 | 3.4E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 221 | 3.78E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 222 | 3.8E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 130 | 2.4E-35 | - |
| SMART | SM00220 | serkin_6 | 55 | 216 | 7.8E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 222 | 29.163401 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 83 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 30 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09010.2 | - | 0 |
| RefSeq | XP_038974742.1 | cold-responsive protein kinase 1-like isoform X3 [Phoenix dactylifera] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8ZN32 | cold-responsive protein kinase 1-like isoform X3 OS=Phoenix dactylifera OX=42345 GN=LOC120105994 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC120105994, gene-LOC120112928 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g34880 |