Basic Information
Locus ID:
gene.Thate01g33560
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 566730470 | 566754756 | - | gene.Thate01g33560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 57,791.65 Da | 51.93 | 90.29 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 426 | 496 | 2.8E-12 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 223 | 416 | 2.5E-30 | IPR002524 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 420 | 497 | 8.76E-16 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 217 | 417 | 3.66E-40 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 221 | 415 | 1.1E-41 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 418 | 498 | 6.6E-18 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 222 | 497 | 3.7E-31 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 156 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_010922408.1 | metal tolerance protein 5 isoform X1 [Elaeis guineensis] | 0 |
| Q5NA18 | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0I4Q3 | Metal tolerance protein 5 OS=Cocos nucifera OX=13894 GN=COCNU_04G002340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology