Basic Information
Locus ID:
gene.Thate01g29610
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 533389003 | 533586547 | - | gene.Thate01g29610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 105,294.72 Da | 43.95 | 91.32 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 629 | 895 | 2.24E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 74 | 8.9E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 626 | 890 | 1.0E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 157 | 216 | 2.0E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 387 | 1.55E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 609 | 906 | 7.52E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 387 | 1.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 295 | 4.8E-65 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 594 | 698 | 2.9E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 699 | 915 | 3.7E-57 | - |
| SMART | SM00220 | serkin_6 | 623 | 895 | 5.5E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 623 | 901 | 38.520111 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 743 | 755 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 629 | 651 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006842574.2 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Amborella trichopoda] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1U8BC88 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Nelumbo nucifera OX=4432 GN=LOC104612976 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology