Basic Information
Locus ID:
gene.Thate01g27230
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 507305703 | 507404584 | - | gene.Thate01g27230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 62,426.75 Da | 41.48 | 87.66 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 460 | 517 | 2.69971E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 80 | 335 | 2.16544E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 80 | 336 | 7.6E-68 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 384 | 443 | 1.4E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 460 | 517 | 7.2E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 365 | 531 | 8.58E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 344 | 4.18E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 163 | 3.8E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 164 | 344 | 2.0E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 345 | 522 | 8.3E-47 | - |
| SMART | SM00054 | efh_1 | 383 | 411 | 9.2E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 492 | 520 | 5.4E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 77 | 336 | 3.2E-91 | IPR000719 |
| SMART | SM00054 | efh_1 | 456 | 484 | 0.13 | IPR002048 |
| SMART | SM00054 | efh_1 | 419 | 447 | 3.4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 336 | 46.661293 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 488 | 523 | 12.114401 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 379 | 414 | 14.094975 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 452 | 487 | 11.75176 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 83 | 107 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 428 | 440 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 392 | 404 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 465 | 477 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 501 | 513 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 198 | 210 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_029122402.1 | calcium-dependent protein kinase 29 [Elaeis guineensis] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PW60 | Calcium-dependent protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_150G00220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology