Basic Information
Locus ID:
gene.Thate01g26240
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 497563392 | 497715302 | - | gene.Thate01g26240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 114,753.57 Da | 39.48 | 86.22 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 40 | 317 | 2.11349E-179 | - |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 605 | 818 | 6.9E-44 | IPR011682 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 358 | 447 | 2.9E-20 | IPR015341 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 41 | 353 | 1.7E-90 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 900 | 1006 | 1.3E-11 | IPR041147 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 461 | 1009 | 1.57E-138 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 358 | 453 | 1.11E-27 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 29 | 356 | 3.28E-105 | IPR011330 |
| Gene3D | G3DSA:2.60.40.1360 | - | 887 | 1014 | 3.5E-34 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 322 | 400 | 9.1E-29 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 401 | 455 | 2.0E-21 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 40 | 321 | 3.8E-122 | IPR027291 |
| Gene3D | G3DSA:2.60.40.1180 | - | 478 | 601 | 1.4E-27 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 602 | 865 | 3.3E-91 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 358 | 432 | 1.9E-22 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_008791035.2 | alpha-mannosidase At3g26720 [Phoenix dactylifera] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1Z0M3 | Alpha-mannosidase (Fragment) OS=Anthurium amnicola OX=1678845 GN=MAN2B1_31 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology