Basic Information
Locus ID:
gene.Thate01g25420
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Porphyromonas-type peptidyl-arginine deiminase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 483800581 | 483806318 | + | gene.Thate01g25420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 10,746.26 Da | 30.44 | 74.85 | 0.05 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G08170.4 | - | 0 |
| RefSeq | XP_010905762.1 | agmatine deiminase [Elaeis guineensis] | 0 |
| A4VFL7 | Agmatine deiminase OS=Stutzerimonas stutzeri (strain A1501) OX=379731 GN=aguA PE=3 SV=1 | 0 | |
| TrEMBL | A0A1D1YST1 | Agmatine deiminase OS=Anthurium amnicola OX=1678845 GN=AIH_0 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah025700 |
| Apiaceae | Apium graveolens | 1 | Ag9G02435 |
| Arecaceae | Cocos nucifera | 2 | scaffold004835G000020, scaffold032126G000040 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.2446.V1.1, AsparagusV1_05.2985.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1051 |
| Hydrocharitaceae | Thalassia testudinum | 4 | gene.Thate01g25420, gene.Thate04g17100, gene.Thate04g19200 ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005988 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G29776 |
| Poaceae | Echinochloa crus-galli | 1 | AH05.3179 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-31898, nbis-gene-361 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-21262, nbisL1-mrna-22663 |
| Salicaceae | Populus euphratica | 1 | populus_peu10399 |