Basic Information
Locus ID:
gene.Thate01g22290
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Glycosyl hydrolases family 38 C-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 429601615 | 429949397 | + | gene.Thate01g22290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 113,805.68 Da | 39.56 | 80.17 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 35 | 311 | 9.97427E-174 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 36 | 347 | 4.7E-91 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 352 | 439 | 4.8E-17 | IPR015341 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 892 | 999 | 1.6E-10 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 599 | 810 | 1.8E-49 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 457 | 1002 | 6.43E-139 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 351 | 439 | 1.54E-24 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 24 | 350 | 1.16E-108 | IPR011330 |
| Gene3D | G3DSA:2.60.40.1180 | - | 462 | 573 | 6.7E-24 | IPR013780 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 35 | 315 | 4.1E-118 | IPR027291 |
| Gene3D | G3DSA:2.70.98.30 | - | 593 | 858 | 6.8E-95 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 394 | 450 | 2.1E-18 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 316 | 393 | 1.8E-30 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 880 | 1002 | 4.6E-34 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 352 | 426 | 2.1E-19 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_038973713.1 | alpha-mannosidase-like isoform X2 [Phoenix dactylifera] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1D1Y7A6 | Alpha-mannosidase OS=Anthurium amnicola OX=1678845 GN=MAN2B1_34 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology