Basic Information
Locus ID:
gene.Thate01g18120
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 305994606 | 305999713 | + | gene.Thate01g18120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 70,470.07 Da | 33.02 | 90.37 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 349 | 648 | 6.63507E-154 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 65 | 324 | 2.8E-6 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 354 | 644 | 1.6E-24 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 29 | 329 | 2.88E-38 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 348 | 649 | 6.54E-44 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 348 | 650 | 2.3E-50 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 28 | 330 | 5.5E-31 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 30 | 330 | 23.846363 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 349 | 649 | 32.323746 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58170.1 | SHV3-like 5. | 0 |
| RefSeq | XP_020102403.1 | glycerophosphodiester phosphodiesterase GDPDL7-like [Ananas comosus] | 0 |
| Q9LVN0 | Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 GN=GDPDL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8D7B1R4 | glycerophosphodiester phosphodiesterase OS=Musa acuminata subsp. malaccensis OX=214687 GN=GSMUA_37630.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology