Basic Information
Locus ID:
gene.Thate01g12140
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 111360140 | 111365729 | + | gene.Thate01g12140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 13,065.95 Da | 50.81 | 89.07 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 94 | 1.15563E-46 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 5 | 116 | 5.2E-41 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 96 | 5.07E-26 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 7.3E-41 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 1.1E-48 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 75 | 9.003338 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_010939604.1 | membrane-anchored ubiquitin-fold protein 3 isoform X2 [Elaeis guineensis] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6I9S9F2 | Membrane-anchored ubiquitin-fold protein OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105058383 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology