Basic Information
Locus ID:
gene.Thate01g11410
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
EFR
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 97368159 | 97368755 | - | gene.Thate01g11410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 18,909.59 Da | 41.77 | 122.13 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 112 | 132 | 1.1 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 172 | 2.55E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 111 | 2.1E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 112 | 174 | 2.1E-11 | IPR032675 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24982.1 | receptor like protein 40. | 0 |
| TrEMBL | A0A4U6T032 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G252700v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30130370, pistato.v30130410 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g11410, gene.Thate09g20290 |