Basic Information
Locus ID:
gene.Thate01g10510
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 85565305 | 85630238 | - | gene.Thate01g10510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 78,967.80 Da | 41.67 | 89.28 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 424 | 694 | 1.44901E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 84 | 7.8E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 132 | 191 | 1.7E-13 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 109 | 124 | 0.61 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 420 | 691 | 1.5E-42 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 252 | 1.19E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 691 | 1.37E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 496 | 719 | 5.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 495 | 8.9E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 274 | 9.2E-51 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 109 | 133 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 177 | 8.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 178 | 201 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 225 | 400.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 418 | 694 | 35.283424 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 281 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_010273793.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6 [Nelumbo nucifera] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1XDF4 | Protein STRUBBELIG-RECEPTOR FAMILY 7 (Fragment) OS=Anthurium amnicola OX=1678845 GN=SRF7_2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology