Basic Information
Locus ID:
gene.Thate01g09800
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 78304578 | 78314673 | + | gene.Thate01g09800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.93 | 86,017.10 Da | 57.52 | 70.56 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 396 | 479 | 1.4E-20 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 496 | 527 | 1.4E-7 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 396 | 480 | 6.3E-30 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 703 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 719 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 107 | - | - |
| Coils | Coil | Coil | 395 | 422 | - | - |
| Coils | Coil | Coil | 430 | 454 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_029118804.1 | uncharacterized protein LOC105039939 [Elaeis guineensis] | 0 |
| TrEMBL | A0A1D1ZA16 | INO80 complex subunit B (Fragment) OS=Anthurium amnicola OX=1678845 GN=Ino80b_4 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology