Basic Information
Locus ID:
gene.Thate01g09570
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 75014004 | 75057317 | - | gene.Thate01g09570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 65,464.23 Da | 43.80 | 87.37 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 132 | 394 | 2.76792E-126 | - |
| Pfam | PF00069 | Protein kinase domain | 133 | 395 | 1.4E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 123 | 423 | 1.09E-81 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 427 | 576 | 2.51E-15 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 415 | 574 | 1.7E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 435 | 504 | 1.7E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 223 | 406 | 2.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 126 | 222 | 3.5E-22 | - |
| SMART | SM00220 | serkin_6 | 133 | 395 | 2.0E-96 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 133 | 395 | 50.378536 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 139 | 165 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 257 | 269 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 71 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_010907987.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Elaeis guineensis] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1XP92 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Anthurium amnicola OX=1678845 GN=CAMK1_2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology