Basic Information
Locus ID:
gene.Thate01g06730
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 46855456 | 46888000 | + | gene.Thate01g06730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 106,111.81 Da | 48.51 | 88.58 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 879 | 920 | 2.01184E-23 | - |
| CDD | cd01989 | STK_N | 29 | 182 | 1.67563E-42 | - |
| Pfam | PF00069 | Protein kinase domain | 591 | 943 | 2.0E-43 | IPR000719 |
| Pfam | PF04564 | U-box domain | 875 | 944 | 3.4E-18 | IPR003613 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 29 | 147 | 4.19E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 871 | 946 | 1.24E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 571 | 855 | 5.8E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 873 | 948 | 1.8E-28 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 664 | 860 | 1.2E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 571 | 661 | 4.3E-23 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 28 | 179 | 3.3E-6 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 878 | 941 | 7.6E-28 | IPR003613 |
| SMART | SM00220 | serkin_6 | 591 | 855 | 3.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 591 | 948 | 35.269291 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 874 | 948 | 31.77552 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 597 | 618 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 706 | 718 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 292 | - | - |
| Coils | Coil | Coil | 372 | 406 | - | - |
| Coils | Coil | Coil | 435 | 486 | - | - |
| Coils | Coil | Coil | 529 | 563 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_008804030.2 | U-box domain-containing protein 33-like [Phoenix dactylifera] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CQB5 | U-box domain-containing protein 33-like OS=Phoenix dactylifera OX=42345 GN=LOC103717427 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology