Basic Information
Locus ID:
gene.Thate01g06290
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 43808061 | 43832555 | - | gene.Thate01g06290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 122,145.56 Da | 42.47 | 77.47 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 693 | 742 | 1.2E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 760 | 801 | 9.3E-9 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 490 | 545 | 8.5E-14 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1003 | 1088 | 5.74E-7 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 844 | 900 | 5.54E-8 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 749 | 800 | 1.23E-16 | IPR011011 |
| Gene3D | G3DSA:3.40.630.30 | - | 954 | 1109 | 5.2E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 842 | 905 | 2.9E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 745 | 825 | 5.6E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 847 | 904 | 4.1E-4 | IPR001965 |
| SMART | SM00249 | PHD_3 | 759 | 800 | 4.0E-11 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 757 | 802 | 10.611401 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 760 | 799 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 28 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36720.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_008779219.1 | uncharacterized protein LOC103698933 isoform X1 [Phoenix dactylifera] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P2H3 | PHD-type domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_41G00900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology