Basic Information
Locus ID:
gene.Thate01g04680
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 31162531 | 31170607 | - | gene.Thate01g04680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 46,110.61 Da | 51.12 | 64.83 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 282 | 314 | 8.5314E-8 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 25 | 85 | 1.6E-9 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 282 | 318 | 4.1E-7 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 282 | 317 | 1.05E-9 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 237 | 319 | 1.9E-14 | - |
| SMART | SM00179 | egfca_6 | 282 | 324 | 2.6E-10 | IPR001881 |
| SMART | SM00181 | egf_5 | 233 | 281 | 1.1 | IPR000742 |
| SMART | SM00181 | egf_5 | 285 | 324 | 0.002 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 282 | 319 | 10.233058 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 282 | 307 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 298 | 309 | - | IPR000152 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_008791610.3 | wall-associated receptor kinase 2-like [Phoenix dactylifera] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A443NLD1 | Putative wall-associated receptor kinase-like protein 16 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00790000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology