halophFGD

Basic Information

Locus ID: gene.Thate01g01650

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr01	8750185	8750520	+	gene.Thate01g01650

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.81	11,994.75 Da	30.96	83.42	0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	43	104	5.42E-8	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	55	111	1.2E-14	-
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	76	99	-	IPR017441

Gene Ontology

Molecular Function:

GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G51550.1	Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception.
RefSeq	XP_004984479.1	receptor-like protein kinase FERONIA [Setaria italica]
Swiss-Prot	Q9SCZ4	Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1
TrEMBL	K4A5M6	Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101764463 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	6	Ah006924, Ah025967, Ah029039, Ah029060, Ah029069, Ah029072
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg51577, Sbi_jg51578
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000020759
Asteraceae	Flaveria trinervia	1	Ftri1G08520
Casuarinaceae	Casuarina equisetifolia	2	Ceq01G2172, Ceq01G2211
Casuarinaceae	Casuarina glauca	2	Cgl01G2412, Cgl01G2458
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno07g04300
Hydrocharitaceae	Thalassia testudinum	32	gene.Thate01g01650, gene.Thate01g01660, gene.Thate01g01680 ... gene.Thate01g18890, gene.Thate01g20260, gene.Thate01g28530, gene.Thate02g19640, gene.Thate02g22870, gene.Thate02g32230, gene.Thate03g01880, gene.Thate03g09010, gene.Thate03g09480, gene.Thate03g10410, gene.Thate03g19080, gene.Thate03g26140, gene.Thate04g00820, gene.Thate04g14130, gene.Thate04g19550, gene.Thate04g19600, gene.Thate04g22460, gene.Thate04g27010, gene.Thate04g27800, gene.Thate04g29760, gene.Thate05g07220, gene.Thate05g23100, gene.Thate05g23140, gene.Thate06g22380, gene.Thate07g11870, gene.Thate07g13570, gene.Thate09g03770, gene.Thate09g17690, gene.Thate09g20760
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_3AG0250360
Poaceae	Triticum dicoccoides	3	gene_TRIDC2AG008820, gene_TRIDC2BG010620 ... gene_TRIDC4AG046980
Poaceae	Zoysia japonica	1	nbis-gene-58004
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_11_RagTag.413, evm.TU.Scaffold_6_RagTag.1830
Zosteraceae	Zostera marina	2	Zosma04g11040.v3.1, Zosma06g12330.v3.1