Basic Information
Locus ID:
gene.Thate01g01500
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CPK13
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 8190467 | 8210639 | + | gene.Thate01g01500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 72,892.84 Da | 48.80 | 90.08 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 59 | 317 | 2.81208E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 60 | 318 | 8.8E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 436 | 499 | 4.4E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 364 | 426 | 1.3E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 319 | 3.1E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 346 | 522 | 5.21E-46 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 145 | 3.5E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 326 | 2.2E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 327 | 502 | 4.7E-53 | - |
| SMART | SM00054 | efh_1 | 473 | 501 | 3.8E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 437 | 465 | 2.6E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 60 | 318 | 4.8E-94 | IPR000719 |
| SMART | SM00054 | efh_1 | 365 | 393 | 3.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 401 | 429 | 1.1 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 361 | 396 | 14.680779 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 433 | 468 | 14.90394 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 318 | 46.675426 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 397 | 432 | 9.185384 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 469 | 504 | 13.230217 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 180 | 192 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 374 | 386 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 482 | 494 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 446 | 458 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_003564533.1 | calcium-dependent protein kinase 3 isoform X2 [Brachypodium distachyon] | 0 |
| Q8LPZ7 | Calcium-dependent protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811P2F5 | Calcium-dependent protein kinase 30 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS24111 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology