Basic Information
Locus ID:
gene.Posoc10g06990
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Mannosyltransferase (PIG-M)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr10 | 33502907 | 33505994 | - | gene.Posoc10g06990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 18,185.79 Da | 49.98 | 77.44 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05007 | Mannosyltransferase (PIG-M) | 102 | 136 | 1.2E-6 | IPR007704 |
| Pfam | PF02953 | Tim10/DDP family zinc finger | 67 | 108 | 6.6E-5 | IPR004217 |
| SUPERFAMILY | SSF144122 | Tim10-like | 84 | 109 | 1.96E-5 | IPR035427 |
| Gene3D | G3DSA:1.10.287.810 | Mitochondrial import inner membrane translocase subunit tim13 like domains | 63 | 112 | 1.4E-6 | IPR035427 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22130.3 | - | 0 |
| RefSeq | XP_022952483.1 | GPI mannosyltransferase 1-like [Cucurbita moschata] | 0 |
| Q500W7 | GPI mannosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=PIGM PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J1GKC7 | GPI mannosyltransferase 1 OS=Cucurbita moschata OX=3662 GN=LOC111455159 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Posidoniaceae | Posidonia oceanica | 37 | gene.Posoc01g06680, gene.Posoc01g06880, gene.Posoc01g26440 ... |