Basic Information
Locus ID:
gene.Posoc10g06760
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr10 | 31094362 | 31096614 | - | gene.Posoc10g06760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.76 | 84,029.20 Da | 65.08 | 69.05 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01535 | PPR repeat | 452 | 475 | 0.046 | IPR002885 |
| Pfam | PF14432 | DYW family of nucleic acid deaminases | 653 | 740 | 5.8E-30 | IPR032867 |
| Pfam | PF01535 | PPR repeat | 479 | 508 | 0.0058 | IPR002885 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 384 | 622 | 1.7E-26 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 479 | 511 | 2.8E-4 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 476 | 510 | 10.676364 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 377 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G15690.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_008810384.2 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Phoenix dactylifera] | 0 |
| Q9ZQE5 | Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PRR8 | Pentatricopeptide repeat-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_18G00320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology