Basic Information
Locus ID:
gene.Posoc10g00540
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr10 | 2908303 | 2915089 | - | gene.Posoc10g00540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 55,830.04 Da | 49.52 | 94.59 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 346 | 384 | 4.7E-9 | IPR000719 |
| Pfam | PF00398 | Ribosomal RNA adenine dimethylase | 29 | 108 | 2.0E-17 | IPR001737 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 213 | 344 | 1.2E-13 | IPR001245 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 35 | 109 | 7.63E-18 | IPR029063 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 212 | 387 | 6.35E-36 | IPR011009 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 32 | 164 | 4.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 346 | 382 | 2.0E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 198 | 284 | 1.1E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 288 | 343 | 7.4E-8 | - |
| SMART | SM00650 | rADcneu6 | 43 | 173 | 8.4E-5 | IPR020598 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 208 | 508 | 16.386267 | IPR000719 |
| ProSiteProfiles | PS51689 | rRNA adenine N(6)-methyltransferase family profile. | 29 | 108 | 16.352797 | IPR001737 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10020.2 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_008799129.1 | probable inactive receptor kinase At5g10020 isoform X2 [Phoenix dactylifera] | 0 |
| Q0WR59 | Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana OX=3702 GN=At5g10020 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B7CHB0 | probable inactive receptor kinase At5g10020 isoform X2 OS=Phoenix dactylifera OX=42345 GN=LOC103713859 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah021343 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc10g00540, gene.Posoc10g00570 |