Basic Information
Locus ID:
gene.Posoc09g11880
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 148836540 | 148837316 | - | gene.Posoc09g11880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.06 | 25,506.54 Da | 36.88 | 78.15 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 3 | 91 | 1.9E-10 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 173 | 211 | 4.9E-7 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 164 | 223 | 5.89E-13 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 161 | 225 | 6.5E-12 | IPR036638 |
| SMART | SM00353 | finulus | 168 | 217 | 1.8E-10 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 162 | 211 | 13.966824 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 131 | - | - |
| Coils | Coil | Coil | 201 | 221 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_039121779.1 | transcription factor MYC3-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1XT20 | Transcription factor bHLH14 (Fragment) OS=Anthurium amnicola OX=1678845 GN=BHLH14_0 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology