Basic Information
Locus ID:
gene.Posoc09g11540
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 148060162 | 148061241 | + | gene.Posoc09g11540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 39,721.71 Da | 37.19 | 70.31 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13415 | Galactose oxidase, central domain | 116 | 162 | 1.8E-7 | - |
| Pfam | PF01344 | Kelch motif | 169 | 203 | 2.5E-7 | IPR006652 |
| Pfam | PF00646 | F-box domain | 6 | 44 | 9.6E-5 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 78 | 323 | 3.4E-39 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 44 | 1.7E-6 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 57 | 344 | 1.6E-33 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 56 | 2.2E-7 | - |
| SMART | SM00612 | kelc_smart | 170 | 217 | 0.0032 | IPR006652 |
| SMART | SM00256 | fbox_2 | 8 | 48 | 1.9E-5 | IPR001810 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 7.6E-6 | IPR006652 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 49 | 8.517177 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_019704430.1 | F-box/kelch-repeat protein At1g80440 [Elaeis guineensis] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A843X6G4 | F-box domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_045369 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology