Basic Information
Locus ID:
gene.Posoc09g08550
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 137420538 | 137440782 | - | gene.Posoc09g08550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 120,878.51 Da | 46.85 | 69.76 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 924 | 956 | 0.016 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 837 | 872 | 0.0029 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 260 | 557 | 7.12E-14 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 752 | 1038 | 2.11E-48 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 286 | 568 | 2.4E-16 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 723 | 1045 | 8.0E-115 | IPR015943 |
| SMART | SM00320 | WD40_4 | 832 | 872 | 6.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 790 | 829 | 0.037 | IPR001680 |
| SMART | SM00320 | WD40_4 | 875 | 914 | 0.12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 967 | 1006 | 69.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 735 | 779 | 3.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 918 | 956 | 7.2E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 839 | 881 | 10.775796 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 925 | 958 | 12.079106 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 925 | 958 | 10.07378 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 796 | 838 | 8.904377 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 816 | 830 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 943 | 957 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 943 | 957 | 2.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 859 | 873 | 2.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 816 | 830 | 2.9E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| Coils | Coil | Coil | 582 | 616 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_010924824.1 | protein SPA1-RELATED 4 isoform X1 [Elaeis guineensis] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9RES5 | protein SPA1-RELATED 4 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105047555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology