Basic Information
Locus ID:
gene.Posoc09g07560
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 133005446 | 133011410 | + | gene.Posoc09g07560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 104,581.60 Da | 50.66 | 74.08 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 280 | 339 | 2.4E-16 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 648 | 874 | 6.4E-69 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 461 | 606 | 7.5E-50 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 407 | 877 | 1.7E-189 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 665 | 839 | 1.7E-189 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 519 | 553 | 8.582755 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 910 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 283 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_010915843.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial [Elaeis guineensis] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1Y4R2 | ribonuclease P (Fragment) OS=Anthurium amnicola OX=1678845 GN=At2g32230_5 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology