Basic Information
Locus ID:
gene.Posoc09g05500
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Short Name:
UBC25
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 124115374 | 124118767 | - | gene.Posoc09g05500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 55,597.38 Da | 43.67 | 70.36 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 230 | 354 | 1.40914E-30 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 230 | 360 | 7.1E-23 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 212 | 392 | 6.26E-39 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 188 | 466 | 2.5E-77 | IPR016135 |
| SMART | SM00212 | ubc_7 | 229 | 385 | 1.2E-18 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 226 | 385 | 30.845451 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15355.1 | ubiquitin-conjugating enzyme 25. | 0 |
| RefSeq | XP_009415750.1 | PREDICTED: putative ubiquitin-conjugating enzyme E2 38 isoform X2 [Musa acuminata subsp. malaccensis] | 0 |
| Q9LUQ5 | Probable ubiquitin-conjugating enzyme E2 25 OS=Arabidopsis thaliana OX=3702 GN=UBC25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A804KEA8 | UBC core domain-containing protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology