Basic Information
Locus ID:
gene.Posoc09g05350
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Receptor protein kinase CLAVATA1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 122987502 | 122991873 | + | gene.Posoc09g05350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 109,362.52 Da | 35.19 | 101.08 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 298 | 319 | 0.45 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 126 | 146 | 0.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 73 | 3.5E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 492 | 550 | 4.0E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 717 | 995 | 7.8E-43 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 435 | 9.42E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 710 | 996 | 1.08E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 368 | 625 | 1.05E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 334 | 4.0E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 800 | 1003 | 1.2E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 147 | 1.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 634 | 3.8E-84 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 799 | 9.6E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 236 | 7.3E-21 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 124 | 143 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 318 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 489 | 513 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 715 | 995 | 2.4E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 368 | 391 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 271 | 294 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 367 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 24.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 1003 | 36.188 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 844 | 856 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_042400015.1 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 isoform X1 [Zingiber officinale] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8J5KSG2 | Protein kinase domain-containing protein OS=Zingiber officinale OX=94328 GN=ZIOFF_046387 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology