Basic Information
Locus ID:
gene.Posoc09g03290
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Leucine-rich repeats, outliers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 99497263 | 99504204 | - | gene.Posoc09g03290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 83,310.51 Da | 30.35 | 96.44 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 139 | 171 | 3.6E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 288 | 510 | 4.45E-29 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 132 | 173 | 2.62E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 576 | 772 | 5.02E-18 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 124 | 177 | 5.9E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 484 | 1.0E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 485 | 629 | 1.9E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 640 | 773 | 6.7E-22 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 663 | 688 | 140.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 353 | 378 | 8.9E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 301 | 326 | 0.0028 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 640 | 661 | 450.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 689 | 714 | 0.02 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 489 | 514 | 0.75 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 575 | 600 | 150.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 716 | 741 | 38.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 515 | 540 | 170.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 327 | 352 | 0.37 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 379 | 404 | 13.0 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 241 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_010251723.1 | PREDICTED: EIN3-binding F-box protein 1-like [Nelumbo nucifera] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PR10 | F-box family protein OS=Zostera marina OX=29655 GN=ZOSMA_17G00680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology