Basic Information
Locus ID:
gene.Posoc09g03220
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Protein mago nashi homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 99252911 | 99279423 | - | gene.Posoc09g03220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 58,024.14 Da | 60.26 | 76.25 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11295 | Mago_nashi | 25 | 156 | 6.25322E-96 | IPR004023 |
| Pfam | PF05773 | RWD domain | 180 | 284 | 2.9E-8 | IPR006575 |
| Pfam | PF02792 | Mago nashi protein | 26 | 157 | 2.3E-65 | IPR004023 |
| SUPERFAMILY | SSF54495 | UBC-like | 178 | 287 | 3.98E-17 | IPR016135 |
| SUPERFAMILY | SSF57850 | RING/U-box | 290 | 369 | 1.01E-8 | - |
| SUPERFAMILY | SSF89817 | Mago nashi protein | 25 | 157 | 7.46E-64 | IPR036605 |
| Gene3D | G3DSA:3.30.1560.10 | Mago nashi | 23 | 165 | 2.4E-70 | IPR036605 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 168 | 292 | 1.2E-19 | IPR016135 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 293 | 380 | 1.2E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 297 | 362 | 0.001 | IPR001841 |
| SMART | SM00591 | RWD2001b | 184 | 290 | 1.3E-14 | IPR006575 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 297 | 363 | 10.010774 | IPR001841 |
| ProSiteProfiles | PS50908 | RWD domain profile. | 184 | 290 | 16.688053 | IPR006575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 485 | - | - |
| Coils | Coil | Coil | 389 | 409 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60300.1 | RWD domain-containing protein. | 0 |
| RefSeq | XP_010919738.1 | E3 ubiquitin-protein ligase RNF25 isoform X2 [Elaeis guineensis] | 0 |
| P49030 | Protein mago nashi homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MAGO2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PTE2 | RING-type domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_17G00650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg14143, jg2450 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_18737, gene_25472 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah025253 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g144310 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg42487, Sbi_jg45111 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg27061 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023484 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71334, Sgl74929 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000000078, gene:ENSEOMG00000002298 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0012630, CQ.Regalona.r1.6BG0013520 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30000730, pistato.v30001560 |
| Apiaceae | Apium graveolens | 2 | Ag1G00428, Ag1G01293 |
| Arecaceae | Cocos nucifera | 2 | COCNU_10G003390, contig69388225G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103704670, gene-LOC103713609 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.3219.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G26766 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G02140.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10009013m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g00120.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g000930.2N, BniB03g036640.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1046 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl02G2544, Cgl02G2545 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno10g04710 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0031s00003.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g21930, gene.Thate07g03150 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-2673, nbisL1-mrna-8022 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.56 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00029737, Pov_00040768 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G14902, Lb2G14934 |
| Poaceae | Echinochloa crus-galli | 6 | AH03.2311, AH08.55, BH03.2084, BH08.7, CH03.2637, CH08.188 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0382430, gene-QOZ80_5BG0429330 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0706620.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_022665 |
| Poaceae | Oryza coarctata | 3 | Oco16G000450, Oco23G005030, Oco24G004590 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g01660.1, LOC_Os12g18880.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G008700, gene-BS78_07G008900 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0101615, Pt_Chr0402694, Pt_Chr0404873 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr06G024410, Chr16G000220, Chr17G000190, Chr20G014030 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G554900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG045340, gene_TRIDC7BG037280 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G323400.1, TraesCS7B02G224300.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb174310_P001, Zm00001eb260270_P002 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-41394, nbis-gene-46327, nbis-gene-51953 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g22345, Zma_g23494 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG03.364, evm.TU.LG12.1343, evm.TU.LG21.523 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc06g12380, gene.Posoc09g03220 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_7_RagTag.247, evm.TU.Scaffold_8_RagTag.1488 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-19472, nbisL1-mrna-8361, nbisL1-mrna-8438 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-8360, nbisL1-mrna-8368 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-15189, nbisL1-mrna-7041 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.132 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002794 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9474 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-18854, nbisL1-mrna-22785 |
| Salicaceae | Populus euphratica | 1 | populus_peu31873 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132611087, gene-LOC132638562 |
| Solanaceae | Solanum chilense | 1 | SOLCI005376000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012135 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_10208 |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G2201, TC04G0124 |
| Zosteraceae | Zostera marina | 1 | Zosma05g01620.v3.1 |