Basic Information
Locus ID:
gene.Posoc09g02980
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 95912339 | 95918905 | + | gene.Posoc09g02980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 26,603.73 Da | 37.15 | 96.21 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 118 | 214 | 1.1E-9 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 117 | 223 | 6.08E-12 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 106 | 231 | 1.2E-14 | IPR036770 |
| SMART | SM00248 | ANK_2a | 190 | 219 | 1.5E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 127 | 156 | 340.0 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 190 | 214 | 11.028328 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 190 | 222 | 11.62102 | IPR002110 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57740.1 | XB3 ortholog 2 in Arabidopsis thaliana. ubiquitin ligase | 0 |
| RefSeq | XP_039131306.1 | probable E3 ubiquitin-protein ligase XBOS32 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q6KAE5 | Probable E3 ubiquitin-protein ligase XBOS32 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS32 PE=2 SV=2 | 0 | |
| TrEMBL | A0A843WB68 | ANK_REP_REGION domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_041324 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology