Basic Information
Locus ID:
gene.Posoc09g02680
Species & Taxonomic ID:
Posidonia oceanica & 55489
Genome Assembly:
GCA_037176725.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 94446805 | 94454729 | + | gene.Posoc09g02680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 42,800.52 Da | 50.17 | 78.00 | -0.32 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00755.1 | F-box family protein. | 0 |
| RefSeq | XP_017699282.1 | F-box protein At4g00755-like isoform X1 [Phoenix dactylifera] | 0 |
| Q8LG03 | F-box protein At4g00755 OS=Arabidopsis thaliana OX=3702 GN=At4g00755 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J5BFE1 | F-box protein At4g00755-like OS=Nyssa sinensis OX=561372 GN=F0562_026573 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg14025, jg2326, jg26852, jg29309, jg29311, jg33998 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3180 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah023081 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4419, Sbi_jg49334 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5848 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000369 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl11166, Sgl16567 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013603, gene:ENSEOMG00000035475 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0004940, CQ.Regalona.r1.2BG0024240 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30003780 |
| Apiaceae | Apium graveolens | 2 | Ag5G01099, Ag6G01158 |
| Arecaceae | Cocos nucifera | 3 | COCNU_07G007060, COCNU_10G005290, COCNU_10G005300 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711141, gene-LOC103716873 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_04.3043.V1.1, AsparagusV1_08.386.V1.1 ... |
| Asteraceae | Flaveria trinervia | 5 | Ftri11G24788, Ftri11G29417, Ftri5G21596, Ftri5G24336 ... |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G00755.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10028752m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g00750.v2.2 |
| Brassicaceae | Brassica nigra | 7 | BniB08g041610.2N, BniB08g042030.2N, BniB08g042880.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq02G2087, Ceq05G0624, Ceq05G0625 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl02G2160, Cgl05G0642, Cgl05G0643, Cgl05G0644 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno16g04840 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g05090 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.934 |
| Plantaginaceae | Plantago ovata | 4 | Pov_00032173, Pov_00032174, Pov_00032175, Pov_00032407 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G10937 |
| Poaceae | Echinochloa crus-galli | 11 | AH01.5079, AH01.654, AH08.714, BH01.5216, BH01.69, BH02.1689 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_3AG0207290, gene-QOZ80_3AG0231100 ... |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.3HG0240630.1, HORVU.MOREX.r3.4HG0413710.2 ... |
| Poaceae | Lolium multiflorum | 11 | gene-QYE76_020852, gene-QYE76_020855, gene-QYE76_020908 ... |
| Poaceae | Oryza coarctata | 4 | Oco05G000990, Oco05G029600, Oco06G000960, Oco06G030570 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g02560.1, LOC_Os03g64360.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G001100, gene-BS78_01G505900 ... |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0100699, Pt_Chr0100789, Pt_Chr0200336, Pt_Chr0202366 ... |
| Poaceae | Sporobolus alterniflorus | 7 | Chr01G038770, Chr04G006350, Chr04G033080, Chr07G005260 ... |
| Poaceae | Thinopyrum elongatum | 4 | Tel3E01G214000, Tel4E01G584000, Tel5E01G898400 ... |
| Poaceae | Triticum dicoccoides | 8 | gene_TRIDC3BG020450, gene_TRIDC4AG071390 ... |
| Poaceae | Triticum aestivum | 13 | TraesCS3B02G145100.1, TraesCS3D02G127000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb001130_P002 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-16821, nbis-gene-3148, nbis-gene-51284 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g2238, Zma_g22654, Zma_g2307 |
| Portulacaceae | Portulaca oleracea | 8 | evm.TU.LG03.2545, evm.TU.LG03.510, evm.TU.LG04.2347 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g02680 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1346, evm.TU.Scaffold_5_RagTag.316 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-10893, nbisL1-mrna-12644 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-18509, nbisL1-mrna-18861 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-10487, nbisL1-mrna-12918 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000006l.543, evm.TU.utg000010l.346 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00009017, Maker00013506 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-1053, nbisL1-mrna-9225 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20621, nbisL1-mrna-6992 |
| Salicaceae | Populus euphratica | 2 | populus_peu27780, populus_peu31716 |
| Solanaceae | Lycium barbarum | 5 | gene-LOC132631844, gene-LOC132631846, gene-LOC132633196 ... |
| Solanaceae | Solanum chilense | 3 | SOLCI000023800, SOLCI002066500, SOLCI003880900 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107001904, gene-LOC107012395, gene-LOC107032042 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.15219_chr06_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G2161 |
| Zosteraceae | Zostera marina | 1 | Zosma01g07580.v3.1 |